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Evolutionary patterns of RNA editing in ferns and their relation to DNA substitution rates: insights from the Pteridaceae
Project summary:
Within Pteridaceae, the genus Adiantum exhibits a slower DNA substitution rate than their sister group, the vittarioids. Preliminary data suggest levels of RNA editing are much lower in the faster-evolving vittarioids. Here, we expand the current vittarioid sampling to truly understand the relationship between RNA editing and DNA substitution rate.
First Name:
Blake Fauskee
Highest degree:
Bachelor of Science
Year obtained:
2019
Applicant Status:
Current student
United States
Ferns and fern allies
Relevant publications (minimum 1, maximum 4):
Fauskee, B. D., E. M. Sigel, K. M. Pryer, and A. L. Grusz. 2021. Variation in frequency of plastid RNA editing within Adiantum (Pteridaceae) implies rapid evolution in fern plastomes. Am J Bot. (in press).
Mower, J. P. 2008. Modeling sites of RNA editing as a fifth nucleotide state reveals progressive loss of edited sites from angiosperm mitochondria. Mol Biol Evol 25: 52-61.
Rothfels, C. J., and E. Schuettpelz. 2014. Accelerated rate of molecular evolution for vittarioid ferns is strong and not driven by selection. Syst Biol 63: 31–54.
Ishibashi, K., I. Small, and T. Shikanai. 2019. Evolutionary model of plastidial RNA editing in angiosperms presumed from genome-wide analysis of Amborella trichopoda. Plant Cell Phys 60:2141–2151.
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Budget: $
2000
Duke University
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