Small Collections Grant
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Upgrading Frenguelli’s diatom collection: digitization to improve availability by the scientific community
Argentina
Database, Digitally image
Cost (USD):
2000
LPC
División Ficología - Museo de La Plata
Objective:
The phycological herbarium (LPC) of Museo de La Plata, Argentina, holds about 17,000 specimens. The diatom collection gathered during the first half of the 20th century by Joaquín Frenguelli (1883-1958), a pioneer of diatom studies in South America, is the most relevant and constitutes a primary reference for worldwide diatomists. This project aims to capture digital images of the type specimens, to digitize the original illustrations and taxonomic cards, and to generate a database to be published at the museum website.
Timetable:
The proposed project is scheduled to be completed in three years and includes 9 activities:
1. Recording the position of the type specimens in the slides with an England finder graticule: Years 1 and 2.
2. Capturing of images of the specimens with a microscope digital camera: Years 1 and 2.
3. Scanning of original illustrations: Year 2.
4. Scanning of taxonomic cards: Years 2 and 3 (first half).
5. Loading of information in a computer-based spreadsheet: Years 1, 2 and Year 3 (first half).
6. Design of database: Year 2.
7. Migration of data to the database: Year 3.
8. Publishing of database on the website: Year 3 (second half).
9. Periodic revision of dataset: Every 3 months, throughout the entire period.
Scoring Rubric
Reviewer's name:
Collection Improvement (max. 120 points)
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Facilitating access to the physical collections by digitization (e.g., data entry, setting up database structure with an outline of the platform to be used, purchasing equipment, and imaging specimens) – up to 30 points.
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Enhancing physical collections by improving the conservation status of specimens in the herbarium (e.g., better folders, protecting covers, mounting paper, labeling, etc.) – up to 30 points.
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Curating specimens (e.g., updating families, species identification, identifying types) – up to 20 points.
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Increasing our understanding of the flora or funga by making new herbarium specimens available, such as processing of backlog or collecting and mounting of new specimens from understudied sites – up to 20 points.
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Securing collections by distribution of duplicates (or orphan collections) to other regional or international herbaria or shipping endangered collections to another herbarium – up to 20 points.
This proposal scores:
/120
Methods & Funding (max. 40 points)
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Match between the proposed budget and methods for the aims described – up to 10 points.
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Perceived need, the extent to which the project will benefit from IAPT funding: e.g., due to active floristic work or contribution to poorly collected sites, due to threatened conditions of collections, and for the degree of involvement of others (outreach and education). We give more points for herbaria in low- and middle-income countries – up to 20 points.
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Sharing duplicate specimens with other herbaria – up to 10 points.
This proposal scores:
/40
Broader Impacts (max. 40 points)
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Degree of regional importance of the collection or the taxonomic importance of the targeted collection – up to 10 points.
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The project will yield durable benefits (specimens, digitized metadata, databases, websites) – up to 15 points.
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The project involves outreach/mentoring and broad dissemination – up to 15 points.
This proposal scores:
/40
Year of last successful SCG application:
Has applicant applied for SCG before?:
Plan:
The Frenguelli Collection consists of 2,435 permanent microscope slides, mainly from samples from Argentina, Chile and Antarctica and includes the type materials of 459 taxa. Diatom specimens contained in the slides to be designated as types will be searched with a light microscope equipped with DIC optics. The position of the specimens selected will be recorded with an England finder graticule and images will be captured with a microscope digital camera.
The paper materials will be digitized with a performant scanner following standardized protocols for historic documents. The documents comprise 1,500 original illustrations (accompanied by handwritten annotations and, occasionally, by light microscope images) and the associated handwritten taxonomic cards with the bibliographic references used by Frenguelli for the identification of each taxon.
All digital files will be assigned a primary key (ID) that uniquely identifies each record. In a first step all data will be loaded in a computer-based spreadsheet following Darwin Core standard. In a second step a relational database will be designed by a computer expert to facilitate the management and sharing of information. Finally, the database will be published online in the official website of the Museo de La Plata, and eventually in other global biodiversity networks, to ensure full availability by the scientific community.
Periodic revisions of datasets will be carried out during this process to warrant high data quality.
Institution:
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Country:
Target areas:
Applicant First Name/s:
email:
"Other" target:
José María Guerrero
Applicant Last Name/s: